MRIQC: individual T1w report

Summary

  • BIDS filename: sub-4041_ses-1_T1w.
  • Date and time: 2022-12-08, 05:00.
  • MRIQC version: 0.16.1.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.553331761835262
cnr2.3775765035461656
efc0.5161676981406231
fber1289.7059843464451
fwhmavg4.23599
fwhmx4.04114
fwhmy4.88815
fwhmz3.77868
icvscsf0.1955449877195737
icvsgm0.41464372660997134
icvswm0.3898112856704549
inumed2.088554859161377
inurange0.8120149314403533
qi10.0
qi20.006606783145776296
rpvecsf29.689926135877858
rpvegm14.762326377631084
rpvewm18.518797879752412
sizex176
sizey256
sizez256
snrcsf3.0721484823454452
snrgm10.919947281486651
snrtotal11.306352233463626
snrwm19.926960936558782
snrdcsf29.219498275103778
snrdgm67.32025883559628
snrdtotal60.59705122664625
snrdwm85.25139656923871
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk3.297522221837273
summarybgmad7.684758099685739
summarybgmean17.776471099296497
summarybgmedian15.24296635016799
summarybgn2487612.0
summarybgp057.433929897844791
summarybgp9534.57800420373678
summarybgstdv8.869184997328546
summarycsfk0.16775607713487872
summarycsfmad104.90705958452573
summarycsfmean370.4099574649088
summarycsfmedian342.7450890056789
summarycsfn23229.0
summarycsfp05229.91985753774645
summarycsfp95579.9897545345127
summarycsfstdv111.56287313916282
summarygmk0.182406857621487
summarygmmad69.26393813532542
summarygmmean791.0403268421816
summarygmmedian789.6674983687699
summarygmn18149.0
summarygmp05675.5805448539554
summarygmp95918.3699672698974
summarygmstdv72.3122303240076
summarywmk0.5298460306743689
summarywmmad47.11970097965204
summarywmmean1002.4984342209779
summarywmmedian999.9999736435711
summarywmn203461.0
summarywmp05923.6146389134228
summarywmp951087.7749073915184
summarywmstdv50.183142294044416
tpmoverlapcsf0.1622631996870041
tpmoverlapgm0.43469130992889404
tpmoverlapwm0.48756685853004456
wm2max0.741569670976268
AcquisitionMatrixPE246
AcquisitionNumber1
AcquisitionTime08:52:8.365000
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20220720
Dcm2bidsVersion2.1.7
DeviceSerialNumber67034
DwellTime3e-06
EchoTime0.00169
FlipAngle7
ImageOrientationPatientDICOM[0.0467662, 0.93818, 0.342973, 0.0313746, 0.3418, -0.939249]
ImageOrientationTextSag>Cor(3.1)>Tra(-0.8)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.259
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.16
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NonlinearGradientCorrectionTrue
NumberOfAverages3
ParallelReductionFactorInPlane2
PartialFourier0.75
PatientPositionHFS
PercentPhaseFOV100
PercentSampling96
PhaseEncodingSteps185
PhaseResolution0.96
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.0340904
ScanOptionsIR\PFP\WE
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP\OSP
SeriesDescriptiontfl_epinav_ME3_1mm_p2 RMS
SeriesNumber19
ShimSetting[2632, 5446, -7478, 242, -68, -844, 331, -55]
SliceThickness1
SoftwareVersionssyngo MR E11
SpoilingStateTrue
StationNameMRC35427
TxRefAmp229.957
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot
md5sum71ae625f71aa48614f6dec4b887bf66e
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.